Metabolic flexibility of enigmatic SAR324 revealed through metagenomics and metatranscriptomicsSHEIK, Cody S; JAIN, Sunit; DICK, Gregory J et al.Environmental microbiology (Print). 2014, Vol 16, Num 1, pp 304-317, issn 1462-2912, 14 p.Article

Visual and statistical comparison of metagenomesMITRA, Suparna; KLAR, Bernhard; HUSON, Daniel H et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 15, pp 1849-1855, issn 1367-4803, 7 p.Article

SPHINX—an algorithm for taxonomic binning of metagenomic sequencesMONZOORUL HAQUE MOHAMMED; TARINI SHANKAR GHOSH; NITIN KUMAR SINGH et al.Bioinformatics (Oxford. Print). 2011, Vol 27, Num 1, pp 22-30, issn 1367-4803, 9 p.Article

ShotgunFunctionalizeR: an R-package for functional comparison of metagenomesKRISTIANSSON, Erik; HUGENHOLTZ, Philip; DALEVI, Daniel et al.Bioinformatics (Oxford. Print). 2009, Vol 25, Num 20, pp 2737-2738, issn 1367-4803, 2 p.Article

A field guide to eukaryotic circular single-stranded DNA viruses: insights gained from metagenomicsROSARIO, Karyna; DUFFY, Siobain; BREITBART, Mya et al.Archives of virology. 2012, Vol 157, Num 10, pp 1851-1871, issn 0304-8608, 21 p.Article

Metagenomic Characterization of Airborne Viral DNA Diversity in the Near-Surface AtmosphereTAE WOONG WHON; KIM, Min-Soo; SEONG WOON ROH et al.Journal of virology. 2012, Vol 86, Num 15, pp 8221-8231, issn 0022-538X, 11 p.Article

Advances in computational analysis of metagenome sequencesDAVENPORT, Colin F; TÜMMLER, Burkhard.Environmental microbiology (Print). 2013, Vol 15, Num 1, pp 1-5, issn 1462-2912, 5 p.Article

Identifying biologically relevant differences between metagenomic communitiesPARKS, Donovan H; BEIKO, Robert G.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 6, pp 715-721, issn 1367-4803, 7 p.Article

Bambus 2: scaffolding metagenomesKOREN, Sergey; TREANGEN, Todd J; POP, Mihai et al.Bioinformatics (Oxford. Print). 2011, Vol 27, Num 21, pp 2964-2971, issn 1367-4803, 8 p.Article

Treephyler: fast taxonomic profiling of metagenomesSCHREIBER, Fabian; GUMRICH, Peter; DANIEL, Rolf et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 7, pp 960-963, issn 1367-4803, 4 p.Article

Metagenomic Analysis of Viruses from Bat Fecal Samples Reveals Many Novel Viruses in Insectivorous Bats in ChinaXINGYI GE; YAN LI; XINGLOU YANG et al.Journal of virology. 2012, Vol 86, Num 8, pp 4620-4630, issn 0022-538X, 11 p.Article

Metagenomic Analysis of the Viral Flora of Pine Marten and European Badger FecesVAN DEN BRAND, Judith M. A; VAN LEEUWEN, Marije; SCHAPENDONK, Claudia M et al.Journal of virology. 2012, Vol 86, Num 4, pp 2360-2365, issn 0022-538X, 6 p.Article

Reference-independent comparative metagenomics using cross-assembly: crAssDUTILH, Bas E; SCHMIEDER, Robert; NULTON, Jim et al.Bioinformatics (Oxford. Print). 2012, Vol 28, Num 24, pp 3225-3231, issn 1367-4803, 7 p.Article

Discovering Functional Novelty in Metagenomes : Examples from Light-Mediated ProcessesSINGH, Amoolya H; DOERKS, Tobias; LETUNIC, Ivica et al.Journal of bacteriology. 2009, Vol 191, Num 1, pp 32-41, issn 0021-9193, 10 p.Article

Metagenomic comparison of direct and indirect soil DNA extraction approachesDELMONT, Tom O; ROBE, Patrick; CLARK, Ian et al.Journal of microbiological methods. 2011, Vol 86, Num 3, pp 397-400, issn 0167-7012, 4 p.Article

Unbiased Parallel Detection of Viral Pathogens in Clinical Samples by Use of a Metagenomic ApproachJIAN YANG; FAN YANG; JIANWEI WANG et al.Journal of clinical microbiology (Print). 2011, Vol 49, Num 10, pp 3463-3469, issn 0095-1137, 7 p.Article

Discovery of a Novel Single-Stranded DNA Virus from a Sea Turtle Fibropapilloma by Using Viral MetagenomicsNG, Terry Fei Fan; MANIRE, Charles; BORROWMAN, Kelly et al.Journal of virology. 2009, Vol 83, Num 6, pp 2500-2509, issn 0022-538X, 10 p.Article

Metagenomic Analysis of the Viromes of Three North American Bat Species: Viral Diversity among Different Bat Species That Share a Common HabitatDONALDSON, Eric F; HASKEW, Aimee N; GATES, J. Edward et al.Journal of virology. 2010, Vol 84, Num 24, pp 13004-13018, issn 0022-538X, 15 p.Article

Metagenomics: microbial diversity through a scratched lensTEMPERTON, Ben; GIOVANNONI, Stephen J.Current opinion in microbiology. 2012, Vol 15, Num 5, pp 605-612, issn 1369-5274, 8 p.Article

NBC: the Naïve Bayes Classification tool webserver for taxonomic classification of metagenomic readsROSEN, Gail L; REICHENBERGER, Erin R; ROSENFELD, Aaron M et al.Bioinformatics (Oxford. Print). 2011, Vol 27, Num 1, pp 127-129, issn 1367-4803, 3 p.Article

A Bioinformatician's Guide to MetagenomicsKUNIN, Victor; COPELAND, Alex; LAPIDUS, Alla et al.Microbiology and molecular biology reviews. 2008, Vol 72, Num 4, issn 1092-2172, 554, 557-578 [23 p.]Article

The molecular basis for adaptive evolution in novel extradiol dioxygenases retrieved from the metagenomeSUENAGA, Hikaru; MIZUTA, Shiori; MIYAZAKI, Kentaro et al.FEMS microbiology ecology. 2009, Vol 69, Num 3, pp 472-480, issn 0168-6496, 9 p.Article

GOHTAM: a website for 'Genomic Origin of Horizontal Transfers, Alignment and Metagenomics'MENIGAUD, Sabine; MALLET, Ludovic; PICORD, Géraldine et al.Bioinformatics (Oxford. Print). 2012, Vol 28, Num 9, pp 1270-1271, issn 1367-4803, 2 p.Article

SmashCommunity: a metagenomic annotation and analysis toolARUMUGAM, Manimozhiyan; HARRINGTON, Eoghan D; FOERSTNER, Konrad U et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 23, pp 2977-2978, issn 1367-4803, 2 p.Article

Estimating DNA coverage and abundance in metagenomes using a gamma approximationHOOPER, Sean D; DALEVI, Daniel; PATI, Amrita et al.Bioinformatics (Oxford. Print). 2010, Vol 26, Num 3, pp 295-301, issn 1367-4803, 7 p.Article